These are quotes from Season 3.

"With all due respect sir, I think you overestimate your position in the chain of command."--The Blessing Way

"Lots and LOTS of files!"--Paperclip

"I've heard the truth, Mulder. Now what I want are the answers."--Paperclip

"There are hits and there are misses--and then there are misses."--Clyde Bruckman's Final Repose

"I can't take you anywhere."--Clyde Bruckman's Final Repose

"Sorry, I didn't mean to give off any 'negative energy'."--Clyde Bruckman's Final Repose

"I only get five?"--The List

"Mulder, this is even hokier than the one they aired on the Fox Network."--Nisei

"Believing is the easy part, Mulder. I just need more than you. I need proof."--Nisei

"Don't you see, Mulder? You're doing their work for them. You're chasing aliens that aren't there, helping them to create a story to cover the shameful truth. And what they can't cover they apologize for. Apology has become policy."--731

"Mulder, would you do me a favor? Would you smell Mr. Jarvis?"--Revelations

"How is it that you're able to go out on a limb whenever you see a light in the sky but you're unwilling to accept the possibility of a miracle?"--Revelations

"Afraid that God is speaking...but that no one's listening."--Revelations

"Mulder, I think the only thing more fortuitous than the evolution of life on this planet is that through purely random laws of biological evolution an intelligence as complex as ours ever emanated from it. The idea of intelligent alien life, aside from being astronomically improbable, is, at its most basic level, downright anti-Darwinian."--War of the Copraphages

"Mulder, are you sure it wasn't a girlie scream?--War of the Coprophages

"Bambi? Her name is Bambi?--War of the Coprophages

"I'm not going to ask you if you just said what I think you just said because I know it's what you just said."--War of the Coprophages

"Smart is sexy."--War of the Coprophages

"Who died now?"--War of the Coprophages

"Why do you always get to drive? Because you're the guy? Because you're the big, macho man?"--Syzygy

"Sure. Fine. Whatever."--Syzygy

"Shut up, Mulder."--Syzygy

"I am not going to be humiliated by you, in front of you, or by having to bring a teenage girl in, on her birthday of all days, to identify the bones of her dead dog, Mr. Tippy."--Syzygy

"Maybe we bury the dead alive."--Apocrypha

"Please explain to me the scientific nature of 'the whammy.'"--Pusher

"Mulder, you're nuts!"--Jose Chung's from Outer Space

"I know it probably doesn't have the sense of closure that you want, but it has more than some of our cases."--Jose Chung's from Outer Space

"Well, he didn't say 'bleep,' he said...."--Jose Chung's from Outer Space

"They found your bleep'n UFO."--Jose Chung's from Outer Space

"Whatever extreme cases I have encountered, I have always viewed through the lens of science."--Avatar

"You're so consumed by your own personal vengeance against life, whether it be its inherent cruelties or its mysteries, that everything takes on a warped significance to fit your megalomaniacal cosmology."--Quagmire